Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm42853-201ENSMUST00000201273 1387 ntBASIC19.71■□□□□ 0.75
NclP09405 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.71■□□□□ 0.75
NclP09405 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
NclP09405 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC19.71■□□□□ 0.75
NclP09405 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.71■□□□□ 0.75
NclP09405 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.71■□□□□ 0.75
NclP09405 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC19.71■□□□□ 0.75
NclP09405 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC19.71■□□□□ 0.75
NclP09405 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NclP09405 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Gm18054-201ENSMUST00000207539 555 ntBASIC19.71■□□□□ 0.75
NclP09405 Gm45880-201ENSMUST00000213041 853 ntBASIC19.71■□□□□ 0.75
NclP09405 AC159896.2-201ENSMUST00000214753 269 ntBASIC19.71■□□□□ 0.75
NclP09405 AC154319.1-201ENSMUST00000216330 312 ntBASIC19.71■□□□□ 0.75
NclP09405 AC134254.1-201ENSMUST00000221362 167 ntBASIC19.71■□□□□ 0.75
NclP09405 AL589735.1-201ENSMUST00000224353 270 ntBASIC19.71■□□□□ 0.75
NclP09405 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NclP09405 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC19.71■□□□□ 0.75
NclP09405 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NclP09405 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.71■□□□□ 0.75
NclP09405 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NclP09405 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC19.7■□□□□ 0.74
NclP09405 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Gm2231-201ENSMUST00000125661 612 ntBASIC19.7■□□□□ 0.74
NclP09405 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Gm19309-201ENSMUST00000218295 205 ntBASIC19.7■□□□□ 0.74
NclP09405 Tyms-ps-201ENSMUST00000219550 915 ntBASIC19.7■□□□□ 0.74
NclP09405 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Snora73a-201ENSMUST00000082453 205 ntBASIC19.7■□□□□ 0.74
NclP09405 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NclP09405 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NclP09405 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NclP09405 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
NclP09405 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC19.69■□□□□ 0.74
NclP09405 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC19.69■□□□□ 0.74
NclP09405 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NclP09405 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Gm5940-201ENSMUST00000117582 1068 ntBASIC19.69■□□□□ 0.74
NclP09405 Gm8805-201ENSMUST00000117848 313 ntBASIC19.69■□□□□ 0.74
NclP09405 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
NclP09405 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC19.69■□□□□ 0.74
NclP09405 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Gm7029-201ENSMUST00000173226 450 ntBASIC19.69■□□□□ 0.74
NclP09405 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC19.69■□□□□ 0.74
NclP09405 Gm6013-201ENSMUST00000212264 699 ntBASIC19.69■□□□□ 0.74
NclP09405 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Gm7399-201ENSMUST00000032395 858 ntBASIC19.69■□□□□ 0.74
NclP09405 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC19.69■□□□□ 0.74
NclP09405 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NclP09405 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NclP09405 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NclP09405 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NclP09405 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NclP09405 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms