Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.88□□□□□ -0.67
LtaP09225 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.88□□□□□ -0.67
LtaP09225 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.88□□□□□ -0.67
LtaP09225 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
LtaP09225 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.88□□□□□ -0.67
LtaP09225 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LtaP09225 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.87□□□□□ -0.67
LtaP09225 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.87□□□□□ -0.67
LtaP09225 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
LtaP09225 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.87□□□□□ -0.67
LtaP09225 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.87□□□□□ -0.67
LtaP09225 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.87□□□□□ -0.67
LtaP09225 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
LtaP09225 Gm8602-201ENSMUST00000184045 607 ntBASIC10.87□□□□□ -0.67
LtaP09225 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Gm18187-201ENSMUST00000196476 984 ntBASIC10.87□□□□□ -0.67
LtaP09225 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LtaP09225 Gm5035-201ENSMUST00000215581 927 ntBASIC10.87□□□□□ -0.67
LtaP09225 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LtaP09225 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Rubie-203ENSMUST00000227803 2430 ntBASIC10.87□□□□□ -0.67
LtaP09225 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LtaP09225 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LtaP09225 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
LtaP09225 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LtaP09225 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.86□□□□□ -0.67
LtaP09225 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
LtaP09225 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LtaP09225 Gm4984-201ENSMUST00000115987 360 ntBASIC10.86□□□□□ -0.67
LtaP09225 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.86□□□□□ -0.67
LtaP09225 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.86□□□□□ -0.67
LtaP09225 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.86□□□□□ -0.67
LtaP09225 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.86□□□□□ -0.67
LtaP09225 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LtaP09225 Gm27839-201ENSMUST00000184242 106 ntBASIC10.86□□□□□ -0.67
LtaP09225 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms