Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm5687-201ENSMUST00000118252 640 ntBASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gm10576-201ENSMUST00000191927 825 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igh-VJ558P01758 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Gm15429-201ENSMUST00000151268 798 ntBASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Gm45668-201ENSMUST00000211271 493 ntBASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Gm15823-201ENSMUST00000064305 670 ntBASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igh-VJ558P01758 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms