Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.87□□□□□ -0.51
CcnkO88874 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.87□□□□□ -0.51
CcnkO88874 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.87□□□□□ -0.51
CcnkO88874 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CcnkO88874 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.87□□□□□ -0.51
CcnkO88874 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.87□□□□□ -0.51
CcnkO88874 Gm27430-201ENSMUST00000184585 107 ntBASIC11.87□□□□□ -0.51
CcnkO88874 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.87□□□□□ -0.51
CcnkO88874 Gm28630-201ENSMUST00000187806 498 ntBASIC11.87□□□□□ -0.51
CcnkO88874 Gm44333-201ENSMUST00000197168 107 ntBASIC11.87□□□□□ -0.51
CcnkO88874 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.87□□□□□ -0.51
CcnkO88874 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
CcnkO88874 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CcnkO88874 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.87□□□□□ -0.51
CcnkO88874 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CcnkO88874 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CcnkO88874 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CcnkO88874 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CcnkO88874 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
CcnkO88874 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Matn2-203ENSMUST00000226766 3252 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
CcnkO88874 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CcnkO88874 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Gm15653-201ENSMUST00000119247 907 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
CcnkO88874 Gm25144-201ENSMUST00000179561 110 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Gm25352-201ENSMUST00000179815 110 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Dupd1-202ENSMUST00000224735 548 ntBASIC11.86□□□□□ -0.51
CcnkO88874 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CcnkO88874 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.86□□□□□ -0.51
CcnkO88874 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CcnkO88874 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
CcnkO88874 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcnkO88874 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CcnkO88874 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CcnkO88874 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.85□□□□□ -0.51
CcnkO88874 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CcnkO88874 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CcnkO88874 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CcnkO88874 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcnkO88874 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms