Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
BckdkO55028 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.36□□□□□ -0.43
BckdkO55028 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.36□□□□□ -0.43
BckdkO55028 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.36□□□□□ -0.43
BckdkO55028 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
BckdkO55028 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Gm17794-201ENSMUST00000220252 955 ntBASIC12.36□□□□□ -0.43
BckdkO55028 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.36□□□□□ -0.43
BckdkO55028 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
BckdkO55028 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
BckdkO55028 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
BckdkO55028 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
BckdkO55028 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
BckdkO55028 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.35□□□□□ -0.43
BckdkO55028 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Gm11524-201ENSMUST00000119349 807 ntBASIC12.35□□□□□ -0.43
BckdkO55028 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.35□□□□□ -0.43
BckdkO55028 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.35□□□□□ -0.43
BckdkO55028 Gm18062-201ENSMUST00000208020 547 ntBASIC12.35□□□□□ -0.43
BckdkO55028 Gm18055-201ENSMUST00000208254 547 ntBASIC12.35□□□□□ -0.43
BckdkO55028 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.35□□□□□ -0.43
BckdkO55028 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
BckdkO55028 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Gm25857-201ENSMUST00000082788 129 ntBASIC12.35□□□□□ -0.43
BckdkO55028 Gm5356-201ENSMUST00000093326 615 ntBASIC12.35□□□□□ -0.43
BckdkO55028 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
BckdkO55028 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.35□□□□□ -0.43
BckdkO55028 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.35□□□□□ -0.43
BckdkO55028 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.35□□□□□ -0.43
BckdkO55028 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BckdkO55028 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BckdkO55028 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BckdkO55028 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.34□□□□□ -0.43
BckdkO55028 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
BckdkO55028 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
BckdkO55028 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BckdkO55028 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
BckdkO55028 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.34□□□□□ -0.43
BckdkO55028 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms