Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.83■□□□□ 0.12
Smarce1O54941 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Smarce1O54941 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.83■□□□□ 0.12
Smarce1O54941 Gm24245-201ENSMUST00000157318 57 ntBASIC15.83■□□□□ 0.12
Smarce1O54941 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.83■□□□□ 0.12
Smarce1O54941 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarce1O54941 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.83■□□□□ 0.12
Smarce1O54941 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarce1O54941 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smarce1O54941 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smarce1O54941 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarce1O54941 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Smarce1O54941 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarce1O54941 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarce1O54941 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarce1O54941 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm12403-201ENSMUST00000121384 959 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.82■□□□□ 0.12
Smarce1O54941 Gm43575-201ENSMUST00000196420 516 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Gm5161-201ENSMUST00000075243 853 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Smarce1O54941 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.82■□□□□ 0.12
Smarce1O54941 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarce1O54941 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarce1O54941 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smarce1O54941 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarce1O54941 Gm38144-201ENSMUST00000192790 465 ntBASIC15.81■□□□□ 0.12
Smarce1O54941 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.81■□□□□ 0.12
Smarce1O54941 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smarce1O54941 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smarce1O54941 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarce1O54941 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarce1O54941 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Smarce1O54941 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Smarce1O54941 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarce1O54941 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarce1O54941 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms