Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Npc1O35604 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.99□□□□□ -0.33
Npc1O35604 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Npc1O35604 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.99□□□□□ -0.33
Npc1O35604 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Gm4984-201ENSMUST00000115987 360 ntBASIC12.99□□□□□ -0.33
Npc1O35604 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.99□□□□□ -0.33
Npc1O35604 Gm13612-201ENSMUST00000119276 390 ntBASIC12.99□□□□□ -0.33
Npc1O35604 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.99□□□□□ -0.33
Npc1O35604 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Npc1O35604 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.99□□□□□ -0.33
Npc1O35604 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.99□□□□□ -0.33
Npc1O35604 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.99□□□□□ -0.33
Npc1O35604 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.99□□□□□ -0.33
Npc1O35604 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.99□□□□□ -0.33
Npc1O35604 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Npc1O35604 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Npc1O35604 Gm5687-201ENSMUST00000118252 640 ntBASIC12.98□□□□□ -0.33
Npc1O35604 Gm6152-201ENSMUST00000151704 340 ntBASIC12.98□□□□□ -0.33
Npc1O35604 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.98□□□□□ -0.33
Npc1O35604 Gm38671-201ENSMUST00000200573 130 ntBASIC12.98□□□□□ -0.33
Npc1O35604 Itm2b-204ENSMUST00000228637 783 ntBASIC12.98□□□□□ -0.33
Npc1O35604 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npc1O35604 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.97□□□□□ -0.33
Npc1O35604 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.97□□□□□ -0.33
Npc1O35604 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.97□□□□□ -0.33
Npc1O35604 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.97□□□□□ -0.33
Npc1O35604 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Npc1O35604 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.97□□□□□ -0.33
Npc1O35604 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Npc1O35604 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.97□□□□□ -0.33
Npc1O35604 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms