Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Gm13223-201ENSMUST00000118609 747 ntBASIC15.84■□□□□ 0.13
Hdac1O09106 Gm38144-201ENSMUST00000192790 465 ntBASIC15.84■□□□□ 0.13
Hdac1O09106 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.84■□□□□ 0.13
Hdac1O09106 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.84■□□□□ 0.13
Hdac1O09106 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac1O09106 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac1O09106 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac1O09106 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Hdac1O09106 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac1O09106 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac1O09106 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Gm13453-201ENSMUST00000118708 357 ntBASIC15.83■□□□□ 0.12
Hdac1O09106 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Hdac1O09106 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.83■□□□□ 0.12
Hdac1O09106 Gm22175-201ENSMUST00000175007 78 ntBASIC15.83■□□□□ 0.12
Hdac1O09106 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.83■□□□□ 0.12
Hdac1O09106 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hdac1O09106 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Hdac1O09106 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.83■□□□□ 0.12
Hdac1O09106 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Hdac1O09106 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.83■□□□□ 0.12
Hdac1O09106 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.83■□□□□ 0.12
Hdac1O09106 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.83■□□□□ 0.12
Hdac1O09106 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Hdac1O09106 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.83■□□□□ 0.12
Hdac1O09106 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac1O09106 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hdac1O09106 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hdac1O09106 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.82■□□□□ 0.12
Hdac1O09106 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Hdac1O09106 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac1O09106 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.81■□□□□ 0.12
Hdac1O09106 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.81■□□□□ 0.12
Hdac1O09106 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.81■□□□□ 0.12
Hdac1O09106 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Hdac1O09106 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.81■□□□□ 0.12
Hdac1O09106 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.81■□□□□ 0.12
Hdac1O09106 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.81■□□□□ 0.12
Hdac1O09106 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.81■□□□□ 0.12
Hdac1O09106 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.81■□□□□ 0.12
Hdac1O09106 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac1O09106 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms