Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.28□□□□□ -0.6
Gm3727J3QM54 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Gm3727J3QM54 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3727J3QM54 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.27□□□□□ -0.6
Gm3727J3QM54 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3727J3QM54 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.27□□□□□ -0.61
Gm3727J3QM54 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3727J3QM54 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gm6973-201ENSMUST00000117080 721 ntBASIC11.26□□□□□ -0.61
Gm3727J3QM54 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gm27459-201ENSMUST00000184860 107 ntBASIC11.26□□□□□ -0.61
Gm3727J3QM54 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm3727J3QM54 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3727J3QM54 Gm10060-201ENSMUST00000212002 111 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms