Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm12585-201ENSMUST00000117307 290 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm6415-201ENSMUST00000118488 348 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm27622-201ENSMUST00000183779 60 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm27430-201ENSMUST00000184585 107 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm44333-201ENSMUST00000197168 107 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh1F7BJK1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm8410-201ENSMUST00000117225 605 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm46209-201ENSMUST00000217912 553 ntBASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms