Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf6F6VAN0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf6F6VAN0 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.67□□□□□ -0.22
Atf6F6VAN0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.67□□□□□ -0.22
Atf6F6VAN0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Gm28631-201ENSMUST00000190740 334 ntBASIC13.67□□□□□ -0.22
Atf6F6VAN0 Gm38144-201ENSMUST00000192790 465 ntBASIC13.67□□□□□ -0.22
Atf6F6VAN0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf6F6VAN0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Gm12341-201ENSMUST00000119724 503 ntBASIC13.66□□□□□ -0.22
Atf6F6VAN0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Gm42550-201ENSMUST00000201553 960 ntBASIC13.66□□□□□ -0.22
Atf6F6VAN0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Atf6F6VAN0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm12859-201ENSMUST00000117834 427 ntBASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm13689-201ENSMUST00000119360 685 ntBASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms