Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm24248-201ENSMUST00000157321 322 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm29763-201ENSMUST00000205306 616 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm12712-201ENSMUST00000120676 801 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a3E9PWQ3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Gm24943-201ENSMUST00000158329 433 ntBASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col6a3E9PWQ3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a3E9PWQ3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a3E9PWQ3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a3E9PWQ3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm25063-201ENSMUST00000104666 94 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm8531-201ENSMUST00000188319 893 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm18123-201ENSMUST00000210874 822 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms