Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Gm14999-201ENSMUST00000121039 624 ntBASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Gm11597-201ENSMUST00000121423 964 ntBASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Gm5070-201ENSMUST00000177599 862 ntBASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Gm39404-201ENSMUST00000216350 313 ntBASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 AC154276.3-201ENSMUST00000227643 998 ntBASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Hfm1D3Z4R1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Gm9062-201ENSMUST00000117712 727 ntBASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Gm14921-201ENSMUST00000118643 908 ntBASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Gm13813-201ENSMUST00000120998 787 ntBASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Hfm1D3Z4R1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Gm5369-201ENSMUST00000217499 588 ntBASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.33■□□□□ 0.53
Hfm1D3Z4R1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hfm1D3Z4R1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 AC125486.1-201ENSMUST00000218701 320 ntBASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms