Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Gm4875-201ENSMUST00000118257 786 ntBASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm25925-201ENSMUST00000158314 306 ntBASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm7775-201ENSMUST00000218871 853 ntBASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm9063-201ENSMUST00000223299 582 ntBASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5-4A0A075B652 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms