Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav7n-4A0A075B620 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav7n-4A0A075B620 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms