Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm5687-201ENSMUST00000118252 640 ntBASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm8810-201ENSMUST00000172895 754 ntBASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm45331-201ENSMUST00000209868 554 ntBASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm8598-201ENSMUST00000221184 836 ntBASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lhx9Q9WUH2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm8213-201ENSMUST00000118191 441 ntBASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Proscos-202ENSMUST00000178990 666 ntBASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx9Q9WUH2 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.65□□□□□ -0.39
Lhx9Q9WUH2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lhx9Q9WUH2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms