Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gm7488-201ENSMUST00000117148 684 ntBASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gm19078-201ENSMUST00000206311 727 ntBASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm11524-201ENSMUST00000119349 807 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm28631-201ENSMUST00000190740 334 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm19220-201ENSMUST00000222682 803 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClcnkaQ9WUB7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClcnkaQ9WUB7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms