Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.37□□□□□ -0.75
CcsQ9WU84 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Gm10253-201ENSMUST00000194270 940 ntBASIC10.37□□□□□ -0.75
CcsQ9WU84 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.37□□□□□ -0.75
CcsQ9WU84 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.37□□□□□ -0.75
CcsQ9WU84 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.37□□□□□ -0.75
CcsQ9WU84 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
CcsQ9WU84 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CcsQ9WU84 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.36□□□□□ -0.75
CcsQ9WU84 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.36□□□□□ -0.75
CcsQ9WU84 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Gm14042-201ENSMUST00000120139 833 ntBASIC10.36□□□□□ -0.75
CcsQ9WU84 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
CcsQ9WU84 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
CcsQ9WU84 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.36□□□□□ -0.75
CcsQ9WU84 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms