Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm13689-201ENSMUST00000119360 685 ntBASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm27892-201ENSMUST00000185017 106 ntBASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clcf1Q9QZM3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm14127-201ENSMUST00000117906 678 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms