Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm11478-201ENSMUST00000117851 599 ntBASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm11803-201ENSMUST00000119966 444 ntBASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm8652-201ENSMUST00000181363 964 ntBASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gm19931-201ENSMUST00000198920 368 ntBASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3aQ9JKX8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gm11814-201ENSMUST00000119515 929 ntBASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Gm16372-201ENSMUST00000073088 450 ntBASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3aQ9JKX8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Gm24196-201ENSMUST00000179161 110 ntBASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3aQ9JKX8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms