Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpxQ9JHS4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Gm24543-201ENSMUST00000103867 82 ntBASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Gm5566-201ENSMUST00000116118 459 ntBASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Gm14057-201ENSMUST00000120631 482 ntBASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Mir7023-201ENSMUST00000185093 64 ntBASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpxQ9JHS4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClpxQ9JHS4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gm13453-201ENSMUST00000118708 357 ntBASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gm14767-201ENSMUST00000121559 586 ntBASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gm18027-201ENSMUST00000218947 619 ntBASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Gm6888-201ENSMUST00000221983 706 ntBASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpxQ9JHS4 BC001981-202ENSMUST00000191393 1545 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms