Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.51□□□□□ -0.41
Trim39Q9ESN2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm3436-201ENSMUST00000179930 840 ntBASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.5□□□□□ -0.41
Trim39Q9ESN2 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim39Q9ESN2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Gm15393-201ENSMUST00000120499 219 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Gm2445-201ENSMUST00000182798 989 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Gm21470-201ENSMUST00000187680 696 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Gm43703-201ENSMUST00000200523 763 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms