Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Gm18206-201ENSMUST00000207027 926 ntBASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ube4bQ9ES00 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube4bQ9ES00 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm12260-201ENSMUST00000122447 411 ntBASIC12.77□□□□□ -0.37
Ube4bQ9ES00 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Mir3113-201ENSMUST00000175478 76 ntBASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm44492-201ENSMUST00000197012 141 ntBASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube4bQ9ES00 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gm15427-201ENSMUST00000117288 531 ntBASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gm45098-201ENSMUST00000207179 657 ntBASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube4bQ9ES00 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms