Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm13611-201ENSMUST00000118269 318 ntBASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm14109-201ENSMUST00000118814 309 ntBASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm27438-201ENSMUST00000183480 110 ntBASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm5904-201ENSMUST00000210286 865 ntBASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-4Q9EQM3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm9550-201ENSMUST00000161130 862 ntBASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-4Q9EQM3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-4Q9EQM3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Nkx2-4Q9EQM3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms