Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Daam2-202ENSMUST00000224595 1926 ntBASIC12.49□□□□□ -0.41
Hmgn3Q9DCB1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm11543-201ENSMUST00000120758 370 ntBASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn3Q9DCB1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms