Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp2aQ9DB34 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm15371-201ENSMUST00000117057 784 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Grk6-205ENSMUST00000224653 2976 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Chmp2aQ9DB34 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Chmp2aQ9DB34 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.9□□□□□ -0.19
Chmp2aQ9DB34 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gm6983-201ENSMUST00000214912 628 ntBASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms