Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm17150-201ENSMUST00000165577 381 ntBASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gm16372-201ENSMUST00000073088 450 ntBASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ssmem1Q9D9Y8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm8213-201ENSMUST00000118191 441 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Ssmem1Q9D9Y8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssmem1Q9D9Y8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssmem1Q9D9Y8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssmem1Q9D9Y8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms