Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp5Q9D7S9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm43703-201ENSMUST00000200523 763 ntBASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm5312-201ENSMUST00000203728 547 ntBASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Chchd1-203ENSMUST00000224633 557 ntBASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp5Q9D7S9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chmp5Q9D7S9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Chmp5Q9D7S9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Gm14822-201ENSMUST00000122247 291 ntBASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp5Q9D7S9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm3436-201ENSMUST00000179930 840 ntBASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms