Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gm18733-201ENSMUST00000173950 856 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Mir8117-201ENSMUST00000184773 107 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gm18049-201ENSMUST00000208909 581 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hdhd3Q9CYW4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Gm15678-201ENSMUST00000117573 960 ntBASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Dupd1-202ENSMUST00000224735 548 ntBASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hdhd3Q9CYW4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms