Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssr1Q9CY50 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Gm25144-201ENSMUST00000179561 110 ntBASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Gm25352-201ENSMUST00000179815 110 ntBASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Gm6888-201ENSMUST00000221983 706 ntBASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Map1b-203ENSMUST00000223725 2669 ntBASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssr1Q9CY50 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Gm44344-201ENSMUST00000200287 129 ntBASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssr1Q9CY50 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gm44719-201ENSMUST00000206404 149 ntBASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms