Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gm9899-201ENSMUST00000065519 555 ntBASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Gm4804-201ENSMUST00000182234 999 ntBASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc1aQ9CU62 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gm12882-201ENSMUST00000121696 517 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Mir1938-201ENSMUST00000158746 100 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gm5279-201ENSMUST00000199575 745 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gm5425-201ENSMUST00000214125 459 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc1aQ9CU62 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Smc1aQ9CU62 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms