Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldnd1Q9CQX5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Gm14109-201ENSMUST00000118814 309 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 AU022133-201ENSMUST00000200601 873 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldnd1Q9CQX5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms