Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.95□□□□□ -0.34
Rnf111Q99ML9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Gm44719-201ENSMUST00000206404 149 ntBASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf111Q99ML9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gm9522-201ENSMUST00000182394 926 ntBASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gm27838-201ENSMUST00000184829 128 ntBASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf111Q99ML9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms