Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm8584-201ENSMUST00000171982 758 ntBASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Gm37986-201ENSMUST00000193285 383 ntBASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm45186-201ENSMUST00000206874 478 ntBASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx6-1Q99MA9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gm14263-201ENSMUST00000117955 746 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Mir5120-201ENSMUST00000175020 78 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gm2260-201ENSMUST00000184965 657 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms