Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clp1Q99LI9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.99□□□□□ -0.17
Clp1Q99LI9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.99□□□□□ -0.17
Clp1Q99LI9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clp1Q99LI9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Gm11439-201ENSMUST00000118598 409 ntBASIC13.98□□□□□ -0.17
Clp1Q99LI9 Gm12176-201ENSMUST00000121420 875 ntBASIC13.98□□□□□ -0.17
Clp1Q99LI9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Gm22121-201ENSMUST00000175148 54 ntBASIC13.98□□□□□ -0.17
Clp1Q99LI9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Gm27341-201ENSMUST00000183570 106 ntBASIC13.98□□□□□ -0.17
Clp1Q99LI9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clp1Q99LI9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Gm23270-201ENSMUST00000104055 131 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Gm11531-201ENSMUST00000117614 555 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Gm15276-201ENSMUST00000145953 498 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Mir5120-201ENSMUST00000175020 78 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Gm37986-201ENSMUST00000193285 383 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.97□□□□□ -0.17
Clp1Q99LI9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clp1Q99LI9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms