Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Gm7488-201ENSMUST00000117148 684 ntBASIC14.06□□□□□ -0.16
Usp11Q99K46 Gm15240-201ENSMUST00000118156 720 ntBASIC14.06□□□□□ -0.16
Usp11Q99K46 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.06□□□□□ -0.16
Usp11Q99K46 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp11Q99K46 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp11Q99K46 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp11Q99K46 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Usp11Q99K46 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp11Q99K46 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Gm28760-201ENSMUST00000185995 736 ntBASIC14.05□□□□□ -0.16
Usp11Q99K46 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Gm42612-201ENSMUST00000197986 623 ntBASIC14.05□□□□□ -0.16
Usp11Q99K46 Gm43170-201ENSMUST00000199827 612 ntBASIC14.05□□□□□ -0.16
Usp11Q99K46 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Usp11Q99K46 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp11Q99K46 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp11Q99K46 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm17795-201ENSMUST00000214505 757 ntBASIC14.04□□□□□ -0.16
Usp11Q99K46 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.04□□□□□ -0.16
Usp11Q99K46 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.04□□□□□ -0.16
Usp11Q99K46 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp11Q99K46 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp11Q99K46 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms