Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb4Q91XZ6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb4Q91XZ6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Gm18905-201ENSMUST00000205454 928 ntBASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb4Q91XZ6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Gm27989-201ENSMUST00000184721 107 ntBASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb4Q91XZ6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms