Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Gm24694-201ENSMUST00000180054 110 ntBASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Gm27663-201ENSMUST00000184839 110 ntBASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Gm29667-201ENSMUST00000190817 490 ntBASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga3Q91XY5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Gm21854-201ENSMUST00000179901 471 ntBASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga3Q91XY5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga3Q91XY5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Pcdhga3Q91XY5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga3Q91XY5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Pcdhga3Q91XY5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga3Q91XY5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Pck2-205ENSMUST00000226352 2784 ntBASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga3Q91XY5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms