Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.15□□□□□ -0.3
Vsx1Q91V10 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm24990-201ENSMUST00000157406 323 ntBASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.15□□□□□ -0.3
Vsx1Q91V10 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.15□□□□□ -0.3
Vsx1Q91V10 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vsx1Q91V10 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vsx1Q91V10 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.15□□□□□ -0.31
Vsx1Q91V10 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.14□□□□□ -0.31
Vsx1Q91V10 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.14□□□□□ -0.31
Vsx1Q91V10 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.14□□□□□ -0.31
Vsx1Q91V10 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm13123-201ENSMUST00000122173 492 ntBASIC13.14□□□□□ -0.31
Vsx1Q91V10 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm7809-201ENSMUST00000153199 742 ntBASIC13.14□□□□□ -0.31
Vsx1Q91V10 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.14□□□□□ -0.31
Vsx1Q91V10 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx1Q91V10 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.13□□□□□ -0.31
Vsx1Q91V10 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms