Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
H1fooQ8VIK3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gm24694-201ENSMUST00000180054 110 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gm27663-201ENSMUST00000184839 110 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gm5279-201ENSMUST00000199575 745 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H1fooQ8VIK3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Mir874-201ENSMUST00000104769 76 ntBASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm28760-201ENSMUST00000185995 736 ntBASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm43094-201ENSMUST00000196549 921 ntBASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms