Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm4607-201ENSMUST00000206649 577 ntBASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col23a1Q8K4G2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Gm11675-201ENSMUST00000121873 832 ntBASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col23a1Q8K4G2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gm12165-201ENSMUST00000117047 342 ntBASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gm12029-201ENSMUST00000120073 832 ntBASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gm5369-201ENSMUST00000217499 588 ntBASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col23a1Q8K4G2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col23a1Q8K4G2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.96■□□□□ 0.14
Col23a1Q8K4G2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col23a1Q8K4G2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Gm12015-201ENSMUST00000117065 843 ntBASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Gm10051-201ENSMUST00000145209 414 ntBASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col23a1Q8K4G2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms