Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Rtn1Q8K0T0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Gm6447-201ENSMUST00000118905 835 ntBASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn1Q8K0T0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Gm5687-201ENSMUST00000118252 640 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Gm18473-201ENSMUST00000220543 868 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Itm2b-204ENSMUST00000228637 783 ntBASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn1Q8K0T0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm6152-201ENSMUST00000151704 340 ntBASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms