Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfwd3Q8CIK8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm23984-201ENSMUST00000157139 203 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm38144-201ENSMUST00000192790 465 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.54□□□□□ -0.4
Rfwd3Q8CIK8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12403-201ENSMUST00000121384 959 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12091-201ENSMUST00000146791 830 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm27701-201ENSMUST00000184498 110 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms