Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15□□□□□ -0.01
Syne4Q8CII8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Gm13570-201ENSMUST00000140763 309 ntBASIC15□□□□□ -0.01
Syne4Q8CII8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Syne4Q8CII8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Syne4Q8CII8 Gm2546-201ENSMUST00000182630 991 ntBASIC15□□□□□ -0.01
Syne4Q8CII8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15□□□□□ -0.01
Syne4Q8CII8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Syne4Q8CII8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Syne4Q8CII8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne4Q8CII8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.99□□□□□ -0.01
Syne4Q8CII8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.99□□□□□ -0.01
Syne4Q8CII8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Gm42997-202ENSMUST00000200321 985 ntBASIC14.99□□□□□ -0.01
Syne4Q8CII8 Gm5950-201ENSMUST00000213337 772 ntBASIC14.99□□□□□ -0.01
Syne4Q8CII8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syne4Q8CII8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Gm12566-201ENSMUST00000121479 359 ntBASIC14.98□□□□□ -0.01
Syne4Q8CII8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.98□□□□□ -0.01
Syne4Q8CII8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.98□□□□□ -0.01
Syne4Q8CII8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Gm5904-201ENSMUST00000210286 865 ntBASIC14.98□□□□□ -0.01
Syne4Q8CII8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.98□□□□□ -0.01
Syne4Q8CII8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syne4Q8CII8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.98□□□□□ -0.01
Syne4Q8CII8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms