Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Mir874-201ENSMUST00000104769 76 ntBASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Gm12260-201ENSMUST00000122447 411 ntBASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Gm25927-201ENSMUST00000175058 117 ntBASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Gm9824-201ENSMUST00000178707 561 ntBASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Dupd1-202ENSMUST00000224735 548 ntBASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gm18766-201ENSMUST00000189811 808 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28bQ8CEG5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Gm16476-201ENSMUST00000221544 139 ntBASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28bQ8CEG5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms