Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim47Q8C0E3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim47Q8C0E3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Gm13369-201ENSMUST00000119442 987 ntBASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim47Q8C0E3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim47Q8C0E3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Gm13226-201ENSMUST00000117838 404 ntBASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Gm8805-201ENSMUST00000117848 313 ntBASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Gm27731-201ENSMUST00000185192 107 ntBASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms