Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk5rap1Q8BTW8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk5rap1Q8BTW8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk5rap1Q8BTW8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm16177-201ENSMUST00000120728 718 ntBASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm43630-201ENSMUST00000201550 776 ntBASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap1Q8BTW8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Matn2-206ENSMUST00000228570 2798 ntBASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap1Q8BTW8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdk5rap1Q8BTW8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdk5rap1Q8BTW8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm6447-201ENSMUST00000118905 835 ntBASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm37424-201ENSMUST00000191727 561 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms