Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Gm37042-201ENSMUST00000193816 581 ntBASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Gm45930-201ENSMUST00000221330 292 ntBASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Scfd1Q8BRF7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Mir7221-201ENSMUST00000184009 72 ntBASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Mir8109-201ENSMUST00000184375 117 ntBASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scfd1Q8BRF7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Gm7809-201ENSMUST00000153199 742 ntBASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scfd1Q8BRF7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Gm27516-201ENSMUST00000184237 98 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms