Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.11□□□□□ -0.15
Rd3Q8BRE0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gm13342-201ENSMUST00000121055 207 ntBASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gm6334-201ENSMUST00000207083 228 ntBASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rd3Q8BRE0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Gm9368-201ENSMUST00000219348 831 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.1□□□□□ -0.15
Rd3Q8BRE0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rd3Q8BRE0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm11793-201ENSMUST00000120433 981 ntBASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm2231-201ENSMUST00000125661 612 ntBASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm6222-202ENSMUST00000182143 629 ntBASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm7783-201ENSMUST00000204795 781 ntBASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms