Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Gm15653-201ENSMUST00000119247 907 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Mir1897-201ENSMUST00000122581 272 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Gm8927-201ENSMUST00000181978 981 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Gm3222-201ENSMUST00000071282 990 ntBASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim6Q8BGE7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm44771-201ENSMUST00000206975 626 ntBASIC14.16□□□□□ -0.14
Trim6Q8BGE7 AW822252-206ENSMUST00000208904 237 ntBASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.16□□□□□ -0.14
Trim6Q8BGE7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim6Q8BGE7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm11434-201ENSMUST00000122379 629 ntBASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms